Database
211 skills in this category
kegg-database
Direct REST API access to KEGG (academic use only). Pathway analysis, gene-pathway mapping, metabolic pathways, drug interactions, ID conversion. For Python workflows with multiple databases, prefer bioservices. Use this for direct HTTP/REST work or KEGG-specific control.
kegg-databasekeggdatabaserest
by K-Dense-AI · claude-scientific-skills
pubmed-database
Direct REST API access to PubMed. Advanced Boolean/MeSH queries, E-utilities API, batch processing, citation management. For Python workflows, prefer biopython (Bio.Entrez). Use this for direct HTTP/REST work or custom API implementations.
pubmed-databasepubmeddatabaserest
by K-Dense-AI · claude-scientific-skills
uniprot-database
Direct REST API access to UniProt. Protein searches, FASTA retrieval, ID mapping, Swiss-Prot/TrEMBL. For Python workflows with multiple databases, prefer bioservices (unified interface to 40+ services). Use this for direct HTTP/REST work or UniProt-specific control.
uniprot-databaseuniprotdatabaserest
by K-Dense-AI · claude-scientific-skills
arxiv-database
Search and retrieve preprints from arXiv via the Atom API. Use this skill when searching for papers in physics, mathematics, computer science, quantitative biology, quantitative finance, statistics, electrical engineering, or economics by keywords, authors, arXiv IDs, date ranges, or categories.
arxiv-databasearxivdatabaseapi
by K-Dense-AI · claude-scientific-skills
brenda-database
Access BRENDA enzyme database via SOAP API. Retrieve kinetic parameters (Km, kcat), reaction equations, organism data, and substrate-specific enzyme information for biochemical research and metabolic pathway analysis.
brenda-databasebrendadatabaseapi
by K-Dense-AI · claude-scientific-skills
get-available-resources
This skill should be used at the start of any computationally intensive scientific task to detect and report available system resources (CPU cores, GPUs, memory, disk space). It creates a JSON file with resource information and strategic recommendations that inform computational approach decisions such as whether to use parallel processing (joblib, multiprocessing), out-of-core computing (Dask, Zarr), GPU acceleration (PyTorch, JAX), or memory-efficient strategies. Use this skill before running analyses, training models, processing large datasets, or any task where resource constraints matter.
get-available-resourcesgetavailableresources
by K-Dense-AI · claude-scientific-skills
interpro-database
Query InterPro for protein family, domain, and functional site annotations. Integrates Pfam, PANTHER, PRINTS, SMART, SUPERFAMILY, and 11 other member databases. Use for protein function prediction, domain architecture analysis, evolutionary classification, and GO term mapping.
interpro-databaseinterprodatabasego
by K-Dense-AI · claude-scientific-skills
market-research-reports
Generate comprehensive market research reports (50+ pages) in the style of top consulting firms (McKinsey, BCG, Gartner). Features professional LaTeX formatting, extensive visual generation with scientific-schematics and generate-image, deep integration with research-lookup for data gathering, and multi-framework strategic analysis including Porter Five Forces, PESTLE, SWOT, TAM/SAM/SOM, and BCG Matrix.
market-research-reportsmarketresearchreports
by K-Dense-AI · claude-scientific-skills
docx
Use this skill whenever the user wants to create, read, edit, or manipulate Word documents (.docx files). Triggers include: any mention of 'Word doc', 'word document', '.docx', or requests to produce professional documents with formatting like tables of contents, headings, page numbers, or letterheads. Also use when extracting or reorganizing content from .docx files, inserting or replacing images in documents, performing find-and-replace in Word files, working with tracked changes or comments, or converting content into a polished Word document. If the user asks for a 'report', 'memo', 'letter', 'template', or similar deliverable as a Word or .docx file, use this skill. Do NOT use for PDFs, spreadsheets, Google Docs, or general coding tasks unrelated to document generation.
docxdocx
by Anthropic · anthropic-official-skills
pdf
Use this skill whenever the user wants to do anything with PDF files. This includes reading or extracting text/tables from PDFs, combining or merging multiple PDFs into one, splitting PDFs apart, rotating pages, adding watermarks, creating new PDFs, filling PDF forms, encrypting/decrypting PDFs, extracting images, and OCR on scanned PDFs to make them searchable. If the user mentions a .pdf file or asks to produce one, use this skill.
pdfpdf
by Anthropic · anthropic-official-skills
market-research
Conduct market research, competitive analysis, investor due diligence, and industry intelligence with source attribution and decision-oriented summaries. Use when the user wants market sizing, competitor comparisons, fund research, technology scans, or research that informs business decisions.
market-researchmarketresearch
by affaan-m · everything-claude-code
prompt-optimizer
分析原始提示，识别意图和差距，匹配ECC组件（技能/命令/代理/钩子），并输出一个可直接粘贴的优化提示。仅提供咨询角色——绝不自行执行任务。触发时机：当用户说“优化提示”、“改进我的提示”、“如何编写提示”、“帮我优化这个指令”或明确要求提高提示质量时。中文等效表达同样触发：“优化prompt”、“改进prompt”、“怎么写prompt”、“帮我优化这个指令”。不触发时机：当用户希望直接执行任务，或说“直接做”时。不触发时机：当用户说“优化代码”、“优化性能”、“optimize performance”、“optimize this code”时——这些是重构/性能优化任务，而非提示优化。origin: community
prompt-optimizerpromptoptimizer
by affaan-m · everything-claude-code
minimax-xlsx
Open, create, read, analyze, edit, or validate Excel/spreadsheet files (.xlsx, .xlsm, .csv, .tsv). Use when the user asks to create, build, modify, analyze, read, validate, or format any Excel spreadsheet, financial model, pivot table, or tabular data file. Covers: creating new xlsx from scratch, reading and analyzing existing files, editing existing xlsx with zero format loss, formula recalculation and validation, and applying professional financial formatting standards. Triggers on 'spreadsheet', 'Excel', '.xlsx', '.csv', 'pivot table', 'financial model', 'formula', or any request to produce tabular data in Excel format.
minimax-xlsxminimaxxlsx
by MiniMax AI · minimax-ai-skills
bindingdb-database
Query BindingDB for measured drug-target binding affinities (Ki, Kd, IC50, EC50). Search by target (UniProt ID), compound (SMILES/name), or pathogen. Essential for drug discovery, lead optimization, polypharmacology analysis, and structure-activity relationship (SAR) studies.
bindingdb-databasebindingdbdatabase
by K-Dense-AI · claude-scientific-skills
biorxiv-database
Efficient database search tool for bioRxiv preprint server. Use this skill when searching for life sciences preprints by keywords, authors, date ranges, or categories, retrieving paper metadata, downloading PDFs, or conducting literature reviews.
biorxiv-databasebiorxivdatabase
by K-Dense-AI · claude-scientific-skills
cbioportal-database
Query cBioPortal for cancer genomics data including somatic mutations, copy number alterations, gene expression, and survival data across hundreds of cancer studies. Essential for cancer target validation, oncogene/tumor suppressor analysis, and patient-level genomic profiling.
cbioportal-databasecbioportaldatabase
by K-Dense-AI · claude-scientific-skills
datacommons-client
Work with Data Commons, a platform providing programmatic access to public statistical data from global sources. Use this skill when working with demographic data, economic indicators, health statistics, environmental data, or any public datasets available through Data Commons. Applicable for querying population statistics, GDP figures, unemployment rates, disease prevalence, geographic entity resolution, and exploring relationships between statistical entities.
datacommons-clientdatacommonsclient
by K-Dense-AI · claude-scientific-skills
drugbank-database
Access and analyze comprehensive drug information from the DrugBank database including drug properties, interactions, targets, pathways, chemical structures, and pharmacology data. This skill should be used when working with pharmaceutical data, drug discovery research, pharmacology studies, drug-drug interaction analysis, target identification, chemical similarity searches, ADMET predictions, or any task requiring detailed drug and drug target information from DrugBank.
drugbank-databasedrugbankdatabase
by K-Dense-AI · claude-scientific-skills
gnomad-database
Query gnomAD (Genome Aggregation Database) for population allele frequencies, variant constraint scores (pLI, LOEUF), and loss-of-function intolerance. Essential for variant pathogenicity interpretation, rare disease genetics, and identifying loss-of-function intolerant genes.
gnomad-databasegnomaddatabase
by K-Dense-AI · claude-scientific-skills
gtex-database
Query GTEx (Genotype-Tissue Expression) portal for tissue-specific gene expression, eQTLs (expression quantitative trait loci), and sQTLs. Essential for linking GWAS variants to gene regulation, understanding tissue-specific expression, and interpreting non-coding variant effects.
gtex-databasegtexdatabase
by K-Dense-AI · claude-scientific-skills
jaspar-database
Query JASPAR for transcription factor binding site (TFBS) profiles (PWMs/PFMs). Search by TF name, species, or class; scan DNA sequences for TF binding sites; compare matrices; essential for regulatory genomics, motif analysis, and GWAS regulatory variant interpretation.
jaspar-databasejaspardatabase
by K-Dense-AI · claude-scientific-skills
latex-posters
Create professional research posters in LaTeX using beamerposter, tikzposter, or baposter. Support for conference presentations, academic posters, and scientific communication. Includes layout design, color schemes, multi-column formats, figure integration, and poster-specific best practices for visual communication.
latex-posterslatexposters
by K-Dense-AI · claude-scientific-skills
monarch-database
Query the Monarch Initiative knowledge graph for disease-gene-phenotype associations across species. Integrates OMIM, ORPHANET, HPO, ClinVar, and model organism databases. Use for rare disease gene discovery, phenotype-to-gene mapping, cross-species disease modeling, and HPO term lookup.
monarch-databasemonarchdatabase
by K-Dense-AI · claude-scientific-skills
openalex-database
Query and analyze scholarly literature using the OpenAlex database. This skill should be used when searching for academic papers, analyzing research trends, finding works by authors or institutions, tracking citations, discovering open access publications, or conducting bibliometric analysis across 240M+ scholarly works. Use for literature searches, research output analysis, citation analysis, and academic database queries.
openalex-databaseopenalexdatabase
by K-Dense-AI · claude-scientific-skills
paper-2-web
This skill should be used when converting academic papers into promotional and presentation formats including interactive websites (Paper2Web), presentation videos (Paper2Video), and conference posters (Paper2Poster). Use this skill for tasks involving paper dissemination, conference preparation, creating explorable academic homepages, generating video abstracts, or producing print-ready posters from LaTeX or PDF sources.
paper-2-webpaperweb
by K-Dense-AI · claude-scientific-skills
scholar-evaluation
Systematically evaluate scholarly work using the ScholarEval framework, providing structured assessment across research quality dimensions including problem formulation, methodology, analysis, and writing with quantitative scoring and actionable feedback.
scholar-evaluationscholarevaluation
by K-Dense-AI · claude-scientific-skills
venue-templates
Access comprehensive LaTeX templates, formatting requirements, and submission guidelines for major scientific publication venues (Nature, Science, PLOS, IEEE, ACM), academic conferences (NeurIPS, ICML, CVPR, CHI), research posters, and grant proposals (NSF, NIH, DOE, DARPA). This skill should be used when preparing manuscripts for journal submission, conference papers, research posters, or grant proposals and need venue-specific formatting requirements and templates.
venue-templatesvenuetemplates
by K-Dense-AI · claude-scientific-skills
metabolomics-workbench-database
Access NIH Metabolomics Workbench via REST API (4,200+ studies). Query metabolites, RefMet nomenclature, MS/NMR data, m/z searches, study metadata, for metabolomics and biomarker discovery.
metabolomics-workbench-databasemetabolomicsworkbenchdatabase
by K-Dense-AI · claude-scientific-skills
astropy
Comprehensive Python library for astronomy and astrophysics. This skill should be used when working with astronomical data including celestial coordinates, physical units, FITS files, cosmological calculations, time systems, tables, world coordinate systems (WCS), and astronomical data analysis. Use when tasks involve coordinate transformations, unit conversions, FITS file manipulation, cosmological distance calculations, time scale conversions, or astronomical data processing.
astropyastropypython
by K-Dense-AI · claude-scientific-skills
edgartools
Python library for accessing, analyzing, and extracting data from SEC EDGAR filings. Use when working with SEC filings, financial statements (income statement, balance sheet, cash flow), XBRL financial data, insider trading (Form 4), institutional holdings (13F), company financials, annual/quarterly reports (10-K, 10-Q), proxy statements (DEF 14A), 8-K current events, company screening by ticker/CIK/industry, multi-period financial analysis, or any SEC regulatory filings.
edgartoolsedgartoolspython
by K-Dense-AI · claude-scientific-skills
gget
Fast CLI/Python queries to 20+ bioinformatics databases. Use for quick lookups: gene info, BLAST searches, AlphaFold structures, enrichment analysis. Best for interactive exploration, simple queries. For batch processing or advanced BLAST use biopython; for multi-database Python workflows use bioservices.
ggetggetpython
by K-Dense-AI · claude-scientific-skills
pathml
Full-featured computational pathology toolkit. Use for advanced WSI analysis including multiplexed immunofluorescence (CODEX, Vectra), nucleus segmentation, tissue graph construction, and ML model training on pathology data. Supports 160+ slide formats. For simple tile extraction from H&E slides, histolab may be simpler.
pathmlpathmlml
by K-Dense-AI · claude-scientific-skills
pydicom
Python library for working with DICOM (Digital Imaging and Communications in Medicine) files. Use this skill when reading, writing, or modifying medical imaging data in DICOM format, extracting pixel data from medical images (CT, MRI, X-ray, ultrasound), anonymizing DICOM files, working with DICOM metadata and tags, converting DICOM images to other formats, handling compressed DICOM data, or processing medical imaging datasets. Applies to tasks involving medical image analysis, PACS systems, radiology workflows, and healthcare imaging applications.
pydicompydicompython
by K-Dense-AI · claude-scientific-skills
sympy
Use this skill when working with symbolic mathematics in Python. This skill should be used for symbolic computation tasks including solving equations algebraically, performing calculus operations (derivatives, integrals, limits), manipulating algebraic expressions, working with matrices symbolically, physics calculations, number theory problems, geometry computations, and generating executable code from mathematical expressions. Apply this skill when the user needs exact symbolic results rather than numerical approximations, or when working with mathematical formulas that contain variables and parameters.
sympysympypython
by K-Dense-AI · claude-scientific-skills
postgres-patterns
PostgreSQL database patterns for query optimization, schema design, indexing, and security. Based on Supabase best practices.
postgres-patternspostgrespatternssecurity
by affaan-m · everything-claude-code
database-migrations
数据库迁移最佳实践，涵盖模式变更、数据迁移、回滚以及零停机部署，适用于PostgreSQL、MySQL及常用ORM（Prisma、Drizzle、Django、TypeORM、golang-migrate）。
database-migrationsdatabasemigrationsprisma
by affaan-m · everything-claude-code
game-developer
Use when building game systems, implementing Unity/Unreal Engine features, or optimizing game performance. Invoke to implement ECS architecture, configure physics systems and colliders, set up multiplayer networking with lag compensation, optimize frame rates to 60+ FPS targets, develop shaders, or apply game design patterns such as object pooling and state machines. Trigger keywords: Unity, Unreal Engine, game development, ECS architecture, game physics, multiplayer networking, game optimization, shader programming, game AI.
game-developergamedeveloperai
by Jeffallan · jeffallan-claude-skills
ensembl-database
Query Ensembl genome database REST API for 250+ species. Gene lookups, sequence retrieval, variant analysis, comparative genomics, orthologs, VEP predictions, for genomic research.
ensembl-databaseensembldatabaserest
by K-Dense-AI · claude-scientific-skills
gene-database
Query NCBI Gene via E-utilities/Datasets API. Search by symbol/ID, retrieve gene info (RefSeqs, GO, locations, phenotypes), batch lookups, for gene annotation and functional analysis.
gene-databasegenedatabaseapi
by K-Dense-AI · claude-scientific-skills
pubchem-database
Query PubChem via PUG-REST API/PubChemPy (110M+ compounds). Search by name/CID/SMILES, retrieve properties, similarity/substructure searches, bioactivity, for cheminformatics.
pubchem-databasepubchemdatabaserest
by K-Dense-AI · claude-scientific-skills
reactome-database
Query Reactome REST API for pathway analysis, enrichment, gene-pathway mapping, disease pathways, molecular interactions, expression analysis, for systems biology studies.
reactome-databasereactomedatabaserest
by K-Dense-AI · claude-scientific-skills
string-database
Query STRING API for protein-protein interactions (59M proteins, 20B interactions). Network analysis, GO/KEGG enrichment, interaction discovery, 5000+ species, for systems biology.
string-databasestringdatabaseapi
by K-Dense-AI · claude-scientific-skills
crosspost
Multi-platform content distribution across X, LinkedIn, Threads, and Bluesky. Adapts content per platform using content-engine patterns. Never posts identical content cross-platform. Use when the user wants to distribute content across social platforms.
crosspostcrosspost
by affaan-m · everything-claude-code
anndata
Data structure for annotated matrices in single-cell analysis. Use when working with .h5ad files or integrating with the scverse ecosystem. This is the data format skill—for analysis workflows use scanpy; for probabilistic models use scvi-tools; for population-scale queries use cellxgene-census.
anndataanndata
by K-Dense-AI · claude-scientific-skills
datamol
Pythonic wrapper around RDKit with simplified interface and sensible defaults. Preferred for standard drug discovery including SMILES parsing, standardization, descriptors, fingerprints, clustering, 3D conformers, parallel processing. Returns native rdkit.Chem.Mol objects. For advanced control or custom parameters, use rdkit directly.
datamoldatamol
by K-Dense-AI · claude-scientific-skills
transformers
This skill should be used when working with pre-trained transformer models for natural language processing, computer vision, audio, or multimodal tasks. Use for text generation, classification, question answering, translation, summarization, image classification, object detection, speech recognition, and fine-tuning models on custom datasets.
transformerstransformers
by K-Dense-AI · claude-scientific-skills
cpp-pro
Writes, optimizes, and debugs C++ applications using modern C++20/23 features, template metaprogramming, and high-performance systems techniques. Use when building or refactoring C++ code requiring concepts, ranges, coroutines, SIMD optimization, or careful memory management — or when addressing performance bottlenecks, concurrency issues, and build system configuration with CMake.
cpp-procpppro
by Jeffallan · jeffallan-claude-skills
database-optimizer
Optimizes database queries and improves performance across PostgreSQL and MySQL systems. Use when investigating slow queries, analyzing execution plans, or optimizing database performance. Invoke for index design, query rewrites, configuration tuning, partitioning strategies, lock contention resolution.
database-optimizerdatabaseoptimizer
by Jeffallan · jeffallan-claude-skills
feature-forge
Conducts structured requirements workshops to produce feature specifications, user stories, EARS-format functional requirements, acceptance criteria, and implementation checklists. Use when defining new features, gathering requirements, or writing specifications. Invoke for feature definition, requirements gathering, user stories, EARS format specs, PRDs, acceptance criteria, or requirement matrices.
feature-forgefeatureforge
by Jeffallan · jeffallan-claude-skills
pandas-pro
Performs pandas DataFrame operations for data analysis, manipulation, and transformation. Use when working with pandas DataFrames, data cleaning, aggregation, merging, or time series analysis. Invoke for data manipulation tasks such as joining DataFrames on multiple keys, pivoting tables, resampling time series, handling NaN values with interpolation or forward-fill, groupby aggregations, type conversion, or performance optimization of large datasets.
pandas-propandaspro
by Jeffallan · jeffallan-claude-skills
postgres-pro
Use when optimizing PostgreSQL queries, configuring replication, or implementing advanced database features. Invoke for EXPLAIN analysis, JSONB operations, extension usage, VACUUM tuning, performance monitoring.
postgres-propostgrespro
by Jeffallan · jeffallan-claude-skills
sql-pro
Optimizes SQL queries, designs database schemas, and troubleshoots performance issues. Use when a user asks why their query is slow, needs help writing complex joins or aggregations, mentions database performance issues, or wants to design or migrate a schema. Invoke for complex queries, window functions, CTEs, indexing strategies, query plan analysis, covering index creation, recursive queries, EXPLAIN/ANALYZE interpretation, before/after query benchmarking, or migrating queries between database dialects (PostgreSQL, MySQL, SQL Server, Oracle).
sql-prosqlpro
by Jeffallan · jeffallan-claude-skills
alphafold-database
Access AlphaFold 200M+ AI-predicted protein structures. Retrieve structures by UniProt ID, download PDB/mmCIF files, analyze confidence metrics (pLDDT, PAE), for drug discovery and structural biology.
alphafold-databasealphafolddatabaseai
by K-Dense-AI · claude-scientific-skills
clinicaltrials-database
Query ClinicalTrials.gov via API v2. Search trials by condition, drug, location, status, or phase. Retrieve trial details by NCT ID, export data, for clinical research and patient matching.
clinicaltrials-databaseclinicaltrialsdatabaseapi
by K-Dense-AI · claude-scientific-skills
clinvar-database
Query NCBI ClinVar for variant clinical significance. Search by gene/position, interpret pathogenicity classifications, access via E-utilities API or FTP, annotate VCFs, for genomic medicine.
clinvar-databaseclinvardatabaseapi
by K-Dense-AI · claude-scientific-skills
ena-database
Access European Nucleotide Archive via API/FTP. Retrieve DNA/RNA sequences, raw reads (FASTQ), genome assemblies by accession, for genomics and bioinformatics pipelines. Supports multiple formats.
ena-databaseenadatabaseapi
by K-Dense-AI · claude-scientific-skills
fda-database
Query openFDA API for drugs, devices, adverse events, recalls, regulatory submissions (510k, PMA), substance identification (UNII), for FDA regulatory data analysis and safety research.
fda-databasefdadatabaseapi
by K-Dense-AI · claude-scientific-skills
omero-integration
Microscopy data management platform. Access images via Python, retrieve datasets, analyze pixels, manage ROIs/annotations, batch processing, for high-content screening and microscopy workflows.
omero-integrationomerointegrationpython
by K-Dense-AI · claude-scientific-skills
optimizing-deep-learning-models
Optimize deep learning models using Adam, SGD, and learning rate scheduling to improve accuracy and reduce training time. Use when asked to "optimize deep learning model" or "improve model performance". Trigger with phrases like 'optimize', 'performance', or 'speed up'.
optimizing-deep-learning-modelsoptimizingdeeplearning
by jeremylongshore · plugins-plus-skills
adapting-transfer-learning-models
Build this skill automates the adaptation of pre-trained machine learning models using transfer learning techniques. it is triggered when the user requests assistance with fine-tuning a model, adapting a pre-trained model to a new dataset, or performing... Use when appropriate context detected. Trig
adapting-transfer-learning-modelsadaptingtransferlearning
by jeremylongshore · plugins-plus-skills
generating-database-seed-data
Process this skill enables AI assistant to generate realistic test data and database seed scripts for development and testing environments. it uses faker libraries to create realistic data, maintains relational integrity, and allows configurable data volumes. u... Use when working with databases or
generating-database-seed-datageneratingdatabaseseed
by jeremylongshore · plugins-plus-skills
chembl-database
Query ChEMBL bioactive molecules and drug discovery data. Search compounds by structure/properties, retrieve bioactivity data (IC50, Ki), find inhibitors, perform SAR studies, for medicinal chemistry.
chembl-databasechembldatabase
by K-Dense-AI · claude-scientific-skills
clinpgx-database
Access ClinPGx pharmacogenomics data (successor to PharmGKB). Query gene-drug interactions, CPIC guidelines, allele functions, for precision medicine and genotype-guided dosing decisions.
clinpgx-databaseclinpgxdatabase
by K-Dense-AI · claude-scientific-skills
cosmic-database
Access COSMIC cancer mutation database. Query somatic mutations, Cancer Gene Census, mutational signatures, gene fusions, for cancer research and precision oncology. Requires authentication.
cosmic-databasecosmicdatabase
by K-Dense-AI · claude-scientific-skills
geo-database
Access NCBI GEO for gene expression/genomics data. Search/download microarray and RNA-seq datasets (GSE, GSM, GPL), retrieve SOFT/Matrix files, for transcriptomics and expression analysis.
geo-databasegeodatabase
by K-Dense-AI · claude-scientific-skills
gwas-database
Query NHGRI-EBI GWAS Catalog for SNP-trait associations. Search variants by rs ID, disease/trait, gene, retrieve p-values and summary statistics, for genetic epidemiology and polygenic risk scores.
gwas-databasegwasdatabase
by K-Dense-AI · claude-scientific-skills
hmdb-database
Access Human Metabolome Database (220K+ metabolites). Search by name/ID/structure, retrieve chemical properties, biomarker data, NMR/MS spectra, pathways, for metabolomics and identification.
hmdb-databasehmdbdatabase
by K-Dense-AI · claude-scientific-skills
opentargets-database
Query Open Targets Platform for target-disease associations, drug target discovery, tractability/safety data, genetics/omics evidence, known drugs, for therapeutic target identification.
opentargets-databaseopentargetsdatabase
by K-Dense-AI · claude-scientific-skills
pdb-database
Access RCSB PDB for 3D protein/nucleic acid structures. Search by text/sequence/structure, download coordinates (PDB/mmCIF), retrieve metadata, for structural biology and drug discovery.
pdb-databasepdbdatabase
by K-Dense-AI · claude-scientific-skills
uspto-database
Access USPTO APIs for patent/trademark searches, examination history (PEDS), assignments, citations, office actions, TSDR, for IP analysis and prior art searches.
uspto-databaseusptodatabase
by K-Dense-AI · claude-scientific-skills
zinc-database
Access ZINC (230M+ purchasable compounds). Search by ZINC ID/SMILES, similarity searches, 3D-ready structures for docking, analog discovery, for virtual screening and drug discovery.
zinc-databasezincdatabase
by K-Dense-AI · claude-scientific-skills
clickhouse-io
ClickHouse database patterns, query optimization, analytics, and data engineering best practices for high-performance analytical workloads.
clickhouse-ioclickhouse
by affaan-m · everything-claude-code
performing-regression-analysis
Execute this skill empowers AI assistant to perform regression analysis and modeling using the regression-analysis-tool plugin. it analyzes datasets, generates appropriate regression models (linear, polynomial, etc.), validates the models, and provides performa... Use when analyzing code or data. Tr
performing-regression-analysisperformingregressionanalysis
by jeremylongshore · plugins-plus-skills
changelog-orchestrator
Draft changelog PRs by collecting GitHub/Slack/Git changes, formatting with templates, running quality gates, and preparing a branch/PR. Use when generating weekly/monthly release notes or when the user asks to create a changelog from recent merges. Trigger with "changelog weekly", "generate release notes", "draft changelog", "create changelog PR".
changelog-orchestratorchangelogorchestratorgit
by jeremylongshore · plugins-plus-skills
hundred-million-offers
Create irresistible offers using the Value Equation, bonus stacking, risk-reversing guarantees, and ethical scarcity. Use when the user mentions "pricing strategy", "irresistible offer", "bonuses and guarantees", "value-to-price ratio", or "offer naming". Covers the MAGIC naming formula and starving
hundred-million-offershundredmillionoffers
by jeremylongshore · plugins-plus-skills
generating-smart-commits
Execute use when generating conventional commit messages from staged git changes. Trigger with phrases like "create commit message", "generate smart commit", "/commit-smart", or "/gc". Automatically analyzes changes to determine commit type (feat, fix, docs), identifies breaking changes, and formats
generating-smart-commitsgeneratingsmartcommits
by jeremylongshore · plugins-plus-skills
detecting-memory-leaks
Detect potential memory leaks and analyze memory usage patterns in code. Use when troubleshooting performance issues related to memory growth or identifying leak sources. Trigger with phrases like "detect memory leaks", "analyze memory usage", or "find memory issues".
detecting-memory-leaksdetectingmemoryleaks
by jeremylongshore · plugins-plus-skills
invoice-organizer
Automatically organizes invoices and receipts for tax preparation by reading messy files, extracting key information, renaming them consistently, and sorting them into logical folders. Turns hours of manual bookkeeping into minutes of automated organization.
invoice-organizerinvoiceorganizer
by davepoon · buildwithclaude
obsidian-bases
Create and edit Obsidian Bases (.base files) with views, filters, formulas, and summaries. Use when working with .base files, creating database-like views of notes, or when the user mentions Bases, table views, card views, filters, or formulas in Obsidian.
obsidian-basesobsidianbases
by davepoon · buildwithclaude
youtube-downloader
Download YouTube videos with customizable quality and format options. Use this skill when the user asks to download, save, or grab YouTube videos. Supports various quality settings (best, 1080p, 720p, 480p, 360p), multiple formats (mp4, webm, mkv), and audio-only downloads as MP3.
video-downloaderyoutubedownloader
by davepoon · buildwithclaude
tuning-hyperparameters
Optimize machine learning model hyperparameters using grid search, random search, or Bayesian optimization. Finds best parameter configurations to maximize performance. Use when asked to "tune hyperparameters" or "optimize model". Trigger with relevant phrases based on skill purpose.
tuning-hyperparameterstuninghyperparameters
by jeremylongshore · plugins-plus-skills
analyzing-logs
Analyze application logs for performance insights and issue detection including slow requests, error patterns, and resource usage. Use when troubleshooting performance issues or debugging errors. Trigger with phrases like "analyze logs", "find slow requests", or "detect error patterns".
analyzing-logsanalyzinglogs
by jeremylongshore · plugins-plus-skills
thought-partner
Collaborative thinking partner for exploring ideas, challenges, and decisions. Use when the user says "think through", "explore", "brainstorm", "help me figure out", asks open-ended questions about strategy or priorities, or needs to work through a problem without a clear solution yet.
thought-partnerthoughtpartner
by jeremylongshore · plugins-plus-skills
pymatgen
Materials science toolkit. Crystal structures (CIF, POSCAR), phase diagrams, band structure, DOS, Materials Project integration, format conversion, for computational materials science.
pymatgenpymatgen
by K-Dense-AI · claude-scientific-skills
domain-name-brainstormer
Generates creative domain name ideas for your project and checks availability across multiple TLDs (.com, .io, .dev, .ai, etc.). Saves hours of brainstorming and manual checking.
domain-name-brainstormerdomainnamebrainstormer
by davepoon · buildwithclaude
about-atlantic-home-mortgage
Background information about Lendtrain powered by Atlantic Home Mortgage — company history, credentials, founder bio, and contact information for borrower trust-building.
about-atlantic-home-mortgageaboutatlantichome
by davepoon · buildwithclaude
openevidence-migration-deep-dive
Execute complex OpenEvidence migrations including EHR integration, data migration, and system transitions.
openevidence-migration-deep-diveopenevidencemigrationdeep
by jeremylongshore · plugins-plus-skills
minimax-docx
Professional DOCX document creation, editing, and formatting using OpenXML SDK (.NET).
minimax-docxminimaxdocx
by MiniMax AI · minimax-ai-skills
prisma-schema-helper
This skill provides automated assistance for prisma schema helper tasks within the Backend Development doma
prisma-schema-helperprismaschemahelper
by jeremylongshore · plugins-plus-skills
redis-cache-manager
This skill provides automated assistance for redis cache manager tasks within the Backend Development domain.
redis-cache-managerrediscachemanager
by jeremylongshore · plugins-plus-skills
database-test-helper
This skill provides automated assistance for database test helper tasks within the Test Automation domain.
database-test-helperdatabasetesthelper
by jeremylongshore · plugins-plus-skills
spark-sql-optimizer
This skill provides automated assistance for spark sql optimizer tasks within the Data Pipelines domain.
spark-sql-optimizersparksqloptimizer
by jeremylongshore · plugins-plus-skills
sql-transform-helper
This skill provides automated assistance for sql transform helper tasks within the Data Pipelines domain.
sql-transform-helpersqltransformhelper
by jeremylongshore · plugins-plus-skills
sql-query-optimizer
This skill provides automated assistance for sql query optimizer tasks within the Data Analytics domain.
sql-query-optimizersqlqueryoptimizer
by jeremylongshore · plugins-plus-skills
form-builder-helper
This skill provides automated assistance for form builder helper tasks within the Business Automation domain.
form-builder-helperformbuilderhelper
by jeremylongshore · plugins-plus-skills
postgres-optimization
PostgreSQL optimization including indexes, query plans, partitioning, JSONB operations, and connection pooling
postgres-optimizationpostgresoptimization
by rohitg00 · awesome-claude-toolkit
redis-patterns
Redis patterns including caching strategies, pub/sub, streams for event processing, Lua scripts, and data structures
redis-patternsredispatterns
by rohitg00 · awesome-claude-toolkit
schema-validator
This skill provides automated assistance for schema validator tasks within the Data Pipelines domain.
schema-validatorschemavalidator
by jeremylongshore · plugins-plus-skills
implementing-database-audit-logging
Process use when you need to track database changes for compliance and security monitoring.
implementing-database-audit-loggingimplementingdatabaseaudit
by jeremylongshore · plugins-plus-skills
optimizing-database-connection-pooling
Process use when you need to work with connection management.
optimizing-database-connection-poolingoptimizingdatabaseconnection
by jeremylongshore · plugins-plus-skills