millitool
scvelo/

scvelo

RNA velocity analysis with scVelo. Estimate cell state transitions from unspliced/spliced mRNA dynamics, infer trajectory directions, compute latent time, and identify driver genes in single-cell RNA-seq data. Complements Scanpy/scVI-tools for trajectory inference.

scvelo
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---
name: scvelo
description: RNA velocity analysis with scVelo. Estimate cell state transitions from unspliced/spliced mRNA dynamics, infer trajectory directions, compute latent time, and identify driver genes in single-cell RNA-seq data. Complements Scanpy/scVI-tools for trajectory inference.
license: BSD-3-Clause
metadata:
    skill-author: Kuan-lin Huang
---

# scVelo — RNA Velocity Analysis

## Overview

scVelo is the leading Python package for RNA velocity analysis in single-cell RNA-seq d
How to Use

Recommended: Install to project (local)

mkdir -p .claude/skills
curl -o .claude/skills/scvelo.md \
  https://raw.githubusercontent.com/K-Dense-AI/claude-scientific-skills/main/scientific-skills/scvelo/SKILL.md

Skill is scoped to this project only. Add .claude/skills/ to your .gitignoreif you don't want to commit it.

Alternative: Clone full repo

git clone https://github.com/K-Dense-AI/claude-scientific-skills

Then reference at scientific-skills/scvelo/SKILL.md