millitool
kegg-database/

kegg-database

Direct REST API access to KEGG (academic use only). Pathway analysis, gene-pathway mapping, metabolic pathways, drug interactions, ID conversion. For Python workflows with multiple databases, prefer bioservices. Use this for direct HTTP/REST work or KEGG-specific control.

keggdatabaserestapipython
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---
name: kegg-database
description: Direct REST API access to KEGG (academic use only). Pathway analysis, gene-pathway mapping, metabolic pathways, drug interactions, ID conversion. For Python workflows with multiple databases, prefer bioservices. Use this for direct HTTP/REST work or KEGG-specific control.
license: Non-academic use of KEGG requires a commercial license
metadata:
    skill-author: K-Dense Inc.
---

# KEGG Database

## Overview

KEGG (Kyoto Encyclopedia of Genes and Genomes) is
How to Use

Recommended: Install to project (local)

mkdir -p .claude/skills
curl -o .claude/skills/kegg-database.md \
  https://raw.githubusercontent.com/K-Dense-AI/claude-scientific-skills/main/scientific-skills/kegg-database/SKILL.md

Skill is scoped to this project only. Add .claude/skills/ to your .gitignoreif you don't want to commit it.

Alternative: Clone full repo

git clone https://github.com/K-Dense-AI/claude-scientific-skills

Then reference at scientific-skills/kegg-database/SKILL.md

Related Skills

bioservices
Unified Python interface to 40+ bioinformatics services. Use when querying multiple databases (UniProt, KEGG, ChEMBL, Reactome) in a single workflow with consistent API. Best for cross-database analysis, ID mapping across services. For quick single-database lookups use gget; for sequence/file manipulation use biopython.
bioservicesbioservicespythonapi

by K-Dense-AI · claude-scientific-skills