cbioportal-database

Query cBioPortal for cancer genomics data including somatic mutations, copy number alterations, gene expression, and survival data across hundreds of cancer studies. Essential for cancer target validation, oncogene/tumor suppressor analysis, and patient-level genomic profiling.

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---
name: cbioportal-database
description: Query cBioPortal for cancer genomics data including somatic mutations, copy number alterations, gene expression, and survival data across hundreds of cancer studies. Essential for cancer target validation, oncogene/tumor suppressor analysis, and patient-level genomic profiling.
license: LGPL-3.0
metadata:
    skill-author: Kuan-lin Huang
---

# cBioPortal Database

## Overview

cBioPortal for Cancer Genomics (https://www.cbioportal.org/) is an open-acce
How to Use

Recommended: Install to project (local)

mkdir -p .claude/skills
curl -o .claude/skills/cbioportal-database.md \
  https://raw.githubusercontent.com/K-Dense-AI/claude-scientific-skills/main/scientific-skills/cbioportal-database/SKILL.md

Skill is scoped to this project only. Add .claude/skills/ to your .gitignoreif you don't want to commit it.

Alternative: Clone full repo

git clone https://github.com/K-Dense-AI/claude-scientific-skills

Then reference at scientific-skills/cbioportal-database/SKILL.md